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"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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Ma's night monkey (Aotus nancymaae) TRAJ gene names are according to the human TRAJ gene names (Germline gene table: Human TRAJ).

IMGT gene name IMGT allele name Fct R T Pr Positions in the locus IMGT/LIGM-DB reference sequences IMGT/LIGM-DB sequences from the literature
Strain Clone names Accession numbers Positions in the sequence Secondary accession numbers Strain Clone names Accession numbers Positions in the sequence
TRAJ2 TRAJ2*01 (F) + + AF027554 [1] #c
TRAJ5 TRAJ5*01 (F) + + AF027559 [1] #c
TRAJ9 TRAJ9*01 (F) + + AF027547 [1] #c
TRAJ15 TRAJ15*01 (F) + + AF027567 [1] #c AF027566 [1] #c
AF027553 [1] #c
AF027557 [1] #c
TRAJ15*02 (F) + + AF027545 [1] #c AF027544 [1] #c
TRAJ22 TRAJ22*01 (F) + + AF027561 [1] #c
TRAJ23 TRAJ23*01 (F) + + AF027548 [1] #c AF027543 [1] #c
TRAJ27 TRAJ27*01 (F) + + AF027552 [1] #c
TRAJ28 TRAJ28*01 (F) + + AF027564 [1] #c
TRAJ30 TRAJ30*01 (F) + + AF027549 [1] #c
TRAJ32 TRAJ32*01 (F) + + AF027542 [1] #c
TRAJ34 TRAJ34*01 (F) + + AF027569 [1] #c
TRAJ37 TRAJ37*01 (F) + + AF027551 [1] #c AF027555 [1] #c
AF027563 [1] #c
TRAJ40 TRAJ40*01 (F) + + AF027541 [1] #c AF027550 [1] #c
TRAJ42 TRAJ42*01 (F) + + AF027558 [1] #c
TRAJ45 TRAJ45*01 (F) + + AF027556 [1] #c AF027562 [1] #c
TRAJ52 TRAJ52*01 (F) + + AF027565 [1] #c
TRAJ52*02 (F) + + AF027568 [1] #c
TRAJ56 TRAJ56*01 (F) + + AF027560 [1] #c

#c: rearranged cDNA.

IMGT references:
  1. [1] Favre N. et al., Immunogenetics, 48, 253-259 (1998). PMID: 9716644
Created:
04/06/2003
Last updated:
29/06/2011
Authors:
Géraldine Folch