Table of alleles: Rat (Rattus norvegicus, Rattus rattus) IGHC

Click on a gene name to get the alignment of the corresponding C-REGION alleles.
Click on an accession number to get the sequence and additional information (IMGT annotations, IMGT flat file, Coding regions...).

Functionality is shown between parentheses, (F) and (P), when the accession number refers to a cDNA sequence and the corresponding genomic gene has not yet been isolated.

Norway rat (Rattus norvegicus)

IGHC
gene name
Exons Fct IGHC
allele name
Accession numbers Confirmed
by
genetics
and/or
data
Description of mutations
IGHA CH1          
H+CH2          
CH3(including CHS) F IGHA*01 M13801    
M          
IGHE CH1 F IGHE*01 K02901 +  
CH2 F IGHE*01 K02901 +  
CH3 F IGHE*01 K02901 +  
CH4(including CHS) F IGHE*01 K02901 +  
M1 F IGHE*01 K02901    
M2 F IGHE*01 K02901    
IGHG1 CH1 F IGHG1*01 M28670    
H F IGHG1*01 M28670    
CH2 F IGHG1*01 M28670    
CH3(including CHS) F IGHG1*01 M28670 +  
IGHG2A CH1 F IGHG2A*01 M28669    
H F IGHG2A*01 M28669    
CH2 F IGHG2A*01 M28669    
CH3(including CHS) F IGHG2A*01 M28669 +  
IGHG2B CH1 F IGHG2B*01 M28671    
H F IGHG2B*01 M28671    
CH2 F IGHG2B*01 M28671    
CH3(including CHS) F IGHG2B*01 M28671 +  
IGHM CH1 (F) IGHM*01 X68782    
CH2 (F) IGHM*01 X68312 + t350  ,F117  |g353  ,W118  |
F IGHM*02 M13800   t350>g,F117>C|g353>t,W118>L|
CH3 (F) IGHM*01 X68312    
CH4(including CHS) (F) IGHM*01 X68312    

Black rat (Rattus rattus)

IGHC
gene name
Exons Fct IGHC
allele name
Accession numbers Confirmed
by
genetics
and/or
data
Description of mutations
IGHG2C CH1 (F) IGHG2C*01 X07189    
H (F) IGHG2C*01 X07189    
CH2 (F) IGHG2C*01 X07189    
CH3(including CHS) (F) IGHG2C*01 X07189    


Created: 22/10/2002
Last updated: Friday, 17-Jan-2020 21:04:43 CET
Author: Nathalie Bosc