Protein displays
- Headers:
- 'IMGT Protein display for V domain'
-
'IMGT Protein display for C domain'
Leader sequence logos of the IG and TR V genes: human (Homo sapiens),
house mouse (Mus musculus)
V-REGION sequence logos of the IG and TR: human (Homo sapiens),
house mouse (Mus musculus)
V-REGION
- IGHV
- Mammalia: human (Homo sapiens), house mouse (Mus musculus), Arabian camel (Camelus dromedarius), llama (Lama glama), (Cricetinae gen. sp.), pig (Sus scrofa), sheep (Ovis aries), Norway rat (Rattus norvegicus), rabbit (Oryctolagus cuniculus), Rhesus monkey (Macaca mulatta)
- Sauropsida: spectacled caiman (Caiman crocodilus)
- Amphibia: African clawed frog (Xenopus laevis)
- Teleostei: Japanese flounder (Paralichthys olivaceus), channel catfish (Ictalurus punctatus), Arctic char (Salvelinus alpinus), Atlantic cod (Gadus morhua), emerald rockcod (Trematomus bernacchii), goldfish (Carassius auratus), blackfin icefish (Chaenocephalus aceratus), ladyfish (Elops saurus), Atlantic salmon (Salmo salar), torafugu (Takifugu rubripes), rainbow trout (Oncorhynchus mykiss), black rockcod (Notothenia coriiceps), zebrafish (Danio rerio), spotted wolffish (Anarhichas minor)
- Chondrichthyes: nurse shark (Ginglymostoma cirratum), bull shark (Carcharhinus leucas), clearnose skate (Raja eglanteria), horn shark (Heterodontus francisci), little skate (Leucoraja erinacea), spotted ratfish (Hydrolagus colliei), sandbar shark (Carcharhinus plumbeus), spotted wobbegong (Orectolobus maculatus)
- Other: marbled lungfish (Protopterus aethiopicus)
- IGKV
- IGLV
- IGIV
- Teleostei: European seabass (Dicentrarchus labrax), common carp (Cyprinus carpio), channel catfish (Ictalurus punctatus), Atlantic cod (Gadus morhua), Atlantic salmon (Salmo salar), rainbow trout (Oncorhynchus mykiss), Japanese amberjack (Seriola quinqueradiata), zebrafish (Danio rerio), spotted wolffish (Anarhichas minor), mandarin fish (Siniperca chuatsi)
- Chondrichthyes: horn shark (Heterodontus francisci), nurse shark (Ginglymostoma cirratum), spotted ratfish (Hydrolagus colliei), sandbar shark (Carcharhinus plumbeus)
The Protein displays below have been generated manually:
D-REGION
The Protein displays below have been generated manually:
J-REGION
- IGHJ
- Mammalia: human (Homo sapiens), house mouse (Mus musculus), llama (Lama glama), pig (Sus scrofa), sheep (Ovis aries), Norway rat (Rattus norvegicus), rabbit (Oryctolagus cuniculus), Rhesus monkey (Macaca mulatta)
- Teleostei: channel catfish (Ictalurus punctatus), ladyfish (Elops saurus), Atlantic salmon (Salmo salar), rainbow trout (Oncorhynchus mykiss), zebrafish (Danio rerio)
- Chondrichthyes: nurse shark (Ginglymostoma cirratum), bull shark (Carcharhinus leucas), clearnose skate (Raja eglanteria), horn shark (Heterodontus francisci), little skate (Leucoraja erinacea), spotted ratfish (Hydrolagus colliei), sandbar shark (Carcharhinus plumbeus)
- IGKJ
- IGLJ
- IGIJ
The Protein displays below have been generated manually:
C-DOMAIN
The Protein displays below have been generated automatically.
Be aware that the CHS and M regions are not displayed.
- IGHC
- Mammalia: human (Homo sapiens), house mouse (Mus musculus), Arabian camel (Camelus dromedarius), (Cricetinae gen. sp.), domestic guinea pig (Cavia porcellus), black rat (Rattus rattus), bovine (Bos taurus), chimpanzee (Pan troglodytes), dog (Canis lupus familiaris), common gibbon (Hylobates lar), western gorilla (Gorilla gorilla), horse (Equus caballus), crab-eating macaque (Macaca fascicularis), gray short-tailed opossum (Monodelphis domestica), Bornean orangutan (Pongo pygmaeus), pig (Sus scrofa), common brushtail (Trichosurus vulpecula), rabbit (Oryctolagus cuniculus), Norway rat (Rattus norvegicus), sheep (Ovis aries), Rhesus monkey (Macaca mulatta)
- Teleostei: Japanese flounder (Paralichthys olivaceus), brown trout (Salmo trutta), common carp (Cyprinus carpio), channel catfish (Ictalurus punctatus), Arctic char (Salvelinus alpinus), Atlantic cod (Gadus morhua), emerald rockcod (Trematomus bernacchii), Atlantic halibut (Hippoglossus hippoglossus), blackfin icefish (Chaenocephalus aceratus), ladyfish (Elops saurus), Atlantic salmon (Salmo salar), rainbow trout (Oncorhynchus mykiss), black rockcod (Notothenia coriiceps), zebrafish (Danio rerio), spotted wolffish (Anarhichas minor)
- Chondrichthyes: clearnose skate (Raja eglanteria), horn shark (Heterodontus francisci), little skate (Leucoraja erinacea), nurse shark (Ginglymostoma cirratum), spotted ratfish (Hydrolagus colliei), sandbar shark (Carcharhinus plumbeus)
- Other: marbled lungfish (Protopterus aethiopicus)
- IGKC
- IGLC
- IGIC
- Teleostei: European seabass (Dicentrarchus labrax), common carp (Cyprinus carpio), channel catfish (Ictalurus punctatus), Atlantic cod (Gadus morhua), Atlantic salmon (Salmo salar), rainbow trout (Oncorhynchus mykiss), Japanese amberjack (Seriola quinqueradiata), zebrafish (Danio rerio), spotted wolffish (Anarhichas minor), mandarin fish (Siniperca chuatsi), three-spined stickleback (Gasterosteus aculeatus)
C-DOMAIN with CHS, M and HINGE regions
The Protein displays below have been obtained manually and display all the domains and regions including the CHS and M regions.
- IGHC
- Mammalia:
human (Homo sapiens),
house mouse (Mus musculus),
sheep (Ovis aries),
bovine (Bos taurus),
pig (Sus scrofa),
gray short-tailed opossum (Monodelphis domestica),
common brush-tailed possum (Trichosurus vulpecula),
Arabian camel (Camelus dromedarius),
domestic horse (Equus caballus),
dog (Canis lupus familiaris),
Norway rat (Rattus norvegicus),
Chimpanzee (Pan troglodytes),
Common gibbon (Hylobates lar),
Gorilla (Gorilla gorilla),
Bornean orangutan (Pongo pygmaeus),
Macaques,
rabbit (Oryctolagus cuniculus)
- Teleostei
- Chondrichthyes:
horn shark (Heterodontus francisci),
Spotted ratfish (Hydrolagus colliei),
Spotted wobbegong shark (Orectolobus maculatus),
clearnose skate (Raja eglanteria),
Little skate (Leucoraja erinacea)
- Other:
African lungfish (Protopterus aethiopicus)
Alignments of alleles
- IGHV:
- Mammalia:
human (Homo sapiens),
Arabian camel (Camelus dromedarius),
llama (Lama glama),
sheep (Ovis aries),
pig (Sus scrofa),
Norway rat (Rattus norvegicus),
rabbit (Oryctolagus cuniculus)
- Sauropsida:
spectacled caiman (Caiman crocodilus),
- Amphibia:
African clawed frog (Xenopus laevis),
- Teleostei:
Atlantic cod (Gadus morhua),
Atlantic salmon (Salmo salar),
Bastard halibut (Paralichtys olivaceus),
Blackfin icefish (Chaenocephalus aceratus),
channel catfish (Ictalurus punctatus),
charr (Salvelinus alpinus),
emerald rockcod (Trematomus bernacchii),
goldfish (Carassius auratus),
ladyfish (Elops saurus),
rainbow trout (Oncorhynchus mykiss),
spotted wolffish (Anarhichas minor),
torafugu (Takifugu rubripes),
turbot (Scophthalmus maximus),
black rockcod (Notothenia coriiceps),
zebrafish (Danio rerio)
-
Chondrichthyes:
bull shark (Carcharhinus leucas),
sandbar shark (Carcharhinus plumbeus),
nurse shark (Ginglymostoma cirratum),
horn shark (Heterodontus francisci),
Spotted ratfish (Hydrolagus colliei),
Spotted wobbegong shark (Orectolobus maculatus),
clearnose skate (Raja eglanteria),
Little skate (Leucoraja erinacea)
- Other:
African lungfish (Protopterus aethiopicus)
- IGHD:
- Mammalia:
human (Homo sapiens),
house mouse (Mus musculus),
pig (Sus scrofa),
Norway rat (Rattus norvegicus),
rabbit (Oryctolagus cuniculus)
-
Teleostei:
channel catfish (Ictalurus punctatus),
rainbow trout (Oncorhynchus mykiss),
zebrafish (Danio rerio)
-
Chondrichthyes:
bull shark (Carcharhinus leucas),
sandbar shark (Carcharhinus plumbeus),
nurse shark (Ginglymostoma cirratum),
horn shark (Heterodontus francisci),
Spotted ratfish (Hydrolagus colliei),
Spotted wobbegong shark (Orectolobus maculatus),
clearnose skate (Raja eglanteria),
Little skate (Leucoraja erinacea)
- IGHJ:
- Mammalia:
human (Homo sapiens),
house mouse (Mus musculus),
llama (Lama glama),
sheep (Ovis aries),
pig (Sus scrofa),
Norway rat (Rattus norvegicus),
rabbit (Oryctolagus cuniculus),
Rhesus monkey (Macaca mulatta)
-
Teleostei:
Atlantic salmon (Salmo salar),
channel catfish (Ictalurus punctatus),
Ladyfish (Elops saurus),
rainbow trout (Oncorhynchus mykiss),
zebrafish (Danio rerio)
-
Chondrichthyes:
bull shark (Carcharhinus leucas),
sandbar shark (Carcharhinus plumbeus),
nurse shark (Ginglymostoma cirratum),
horn shark (Heterodontus francisci),
Spotted ratfish (Hydrolagus colliei),
Spotted wobbegong shark (Orectolobus maculatus),
clearnose skate (Raja eglanteria),
Little skate (Leucoraja erinacea)
- IGHC:
- Mammalia:
human (Homo sapiens),
house mouse (Mus musculus),
Chimpanzee (Pan troglodytes),
Macaques,
Rhesus monkey (Macaca mulatta)
Common gibbon (Hylobates lar),
Gorilla (Gorilla gorilla),
Orangutan (Pongo pygmaeus),
sheep (Ovis aries),
bovine (Bos taurus),
pig (Sus scrofa),
gray short-tailed opossum (Monodelphis domestica),
common brush-tailed possum (Trichosurus vulpecula),
Arabian camel (Camelus dromedarius),
horse (Equus caballus),
dog (Canis lupus familiaris),
Norway rat (Rattus norvegicus),
rabbit (Oryctolagus cuniculus),
- Teleostei:
Atlantic cod (Gadus morhua),
Atlantic halibut (Hippoglossus hippoglossus),
Atlantic salmon (Salmo salar),
Bastard halibut (Paralichthys olivaceus),
Blackfin icefish (Chaenocephalus aceratus),
Brown trout (Salmo trutta),
channel catfish (Ictalurus punctatus),
Charr (Salvelinus alpinus),
Common carp (Cyprinus carpio),
Emerald rockcod (Trematomus bernacchii),
Ladyfish (Elops saurus),
rainbow trout (Oncorhynchus mykiss),
Spotted wolffish (Anarhichas minor),
Yellowbelly rockcod (Notothenia coriiceps),
zebrafish (Danio rerio)
- Chondrichthyes:
sandbar shark (Carcharhinus plumbeus),
nurse shark (Ginglymostoma cirratum),
horn shark (Heterodontus francisci),
Spotted ratfish (Hydrolagus colliei),
Spotted wobbegong shark (Orectolobus maculatus),
clearnose skate (Raja eglanteria),
Little skate (Leucoraja erinacea)
- Other:
African lungfish (Protopterus aethiopicus)
- IGKV:
- IGKJ:
- IGKC:
- IGLV:
- IGLJ:
- IGLC:
-
IGIV:
- Teleostei:
Atlantic cod (Gadus morhua),
Atlantic salmon (Salmo salar),
channel catfish (Ictalurus punctatus),
Chinese perch (Siniperca chuatsi),
Common carp (Cyprinus carpio),
European sea bass (Dicentrarchus labrax),
Five-ray yellowtail (Seriola quinqueradiata),
rainbow trout (Oncorhynchus mykiss),
Spotted wolffish (Anarhichas minor),
zebrafish (Danio rerio)
- Chondrichthyes:
sandbar shark (Carcharhinus plumbeus),
nurse shark (Ginglymostoma cirratum),
Spotted ratfish (Hydrolagus colliei),
horn shark (Heterodontus francisci)
- IGIJ:
- IGIC:
- Teleostei:
Atlantic cod (Gadus morhua),
Atlantic salmon (Salmo salar),
channel catfish (Ictalurus punctatus),
Chinese perch (Siniperca chuatsi),
Common carp (Cyprinus carpio),
European sea bass (Dicentrarchus labrax),
Five-ray yellowtail (Seriola quinqueradiata),
rainbow trout (Oncorhynchus mykiss),
Spotted wolffish (Anarhichas minor),
Three spined stickleback (Gasterosteus aculeatus),
zebrafish (Danio rerio)
- TRAV:
- TRAJ:
- TRAC:
- TRBV:
- TRBD:
- TRBJ:
- TRBC:
- TRGV:
- TRGJ:
- TRGC:
-
TRDV:
-
TRDD:
-
TRDJ:
-
TRDC:
Tables of alleles
-
IGHV:
- Mammalia:
human (Homo sapiens),
Arabian camel (Camelus dromedarius),
llama (Lama glama),
sheep (Ovis aries),
pig (Sus scrofa)
- Amphibia:
African clawed frog (Xenopus laevis)
- Sauropsida:
spectacled caiman (Caiman crocodilus)
- Teleostei:
Atlantic cod (Gadus morhua),
Atlantic salmon (Salmo salar),
Bastard halibut (Paralichtys olivaceus),
Blackfin icefish (Chaenocephalus aceratus),
channel catfish (Ictalurus punctatus),
Charr (Salvelinus alpinus),
Emerald rockcod (Trematomus bernacchii),
Goldfish (Carassius auratus),
Ladyfish (Elops saurus),
rainbow trout (Oncorhynchus mykiss),
Spotted wolffish (Anarhichas minor),
Torafugu (Takifugu rubripes),
turbot (Scophthalmus maximus),
Yellowbelly rockcod (Notothenia coriiceps),
zebrafish (Danio rerio)
- Other:
African lungfish (Protopterus aethiopicus)
-
IGHD:
-
IGHJ:
-
IGHC:
-
IGKV:
-
IGKJ:
-
IGKC:
-
IGLV:
-
IGLJ:
-
IGLC:
-
IGIV:
- Teleostei:
Atlantic cod (Gadus morhua),
Atlantic salmon (Salmo salar),
channel catfish (Ictalurus punctatus),
Chinese perch (Siniperca chuatsi),
Common carp (Cyprinus carpio),
European sea bass (Dicentrarchus labrax),
Five-ray yellowtail (Seriola quinqueradiata),
rainbow trout (Oncorhynchus mykiss),
Spotted wolffish (Anarhichas minor),
zebrafish (Danio rerio)
- Chondrichthyes:
sandbar shark (Carcharhinus plumbeus),
nurse shark (Ginglymostoma cirratum),
Spotted ratfish (Hydrolagus colliei),
horn shark (Heterodontus francisci)
-
IGIJ:
-
TRAV:
-
TRAJ:
-
TRAC:
-
TRBV:
-
TRBD:
-
TRBJ:
-
TRBC:
-
TRGV:
-
TRGJ:
-
TRGC:
-
TRDV:
-
TRDD:
-
TRDJ:
-
TRDC:
Allotypes
Isotypes
Particularities in protein designations
- Created:
- 18/04/1997
- Last updated:
- Wednesday, 24-Apr-2013 22:00:42 CEST
- Editor:
- Chantal Ginestoux
