Alignment of alleles: Human IGKV3-11

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).



                                      1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                     E   I   V   L   T   Q   S   P   A   T   L   S   L   S   P   G   E   R   A   T
  X01668  ,IGKV3-11*01,L6           GAA ATT GTG TTG ACA CAG TCT CCA GCC ACC CTG TCT TTG TCT CCA GGG GAA AGA GCC ACC

  X92342  ,IGKV3-11*01,L6a          --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  L37726  ,IGKV3-11*01,13K20/13K23  --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  K02768  ,IGKV3-11*02,Vg           --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

                                                            ____________________CDR1-IMGT__________________
                                     21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                     L   S   C   R   A   S   Q   S   V   S   S   Y                           L   A
  X01668  ,IGKV3-11*01,L6           CTC TCC TGC AGG GCC AGT CAG AGT GTT AGC AGC TAC ... ... ... ... ... ... TTA GCC

  X92342  ,IGKV3-11*01,L6a          --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- ---

  L37726  ,IGKV3-11*01,13K20/13K23  --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- ---

  K02768  ,IGKV3-11*02,Vg           --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- ---

                                                                                                ______________CDR2- 
                                     41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                     W   Y   Q   Q   K   P   G   Q   A   P   R   L   L   I   Y   D   A   S
  X01668  ,IGKV3-11*01,L6           TGG TAC CAA CAG AAA CCT GGC CAG GCT CCC AGG CTC CTC ATC TAT GAT GCA TCC ... ...

  X92342  ,IGKV3-11*01,L6a          --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... ...

  L37726  ,IGKV3-11*01,13K20/13K23  --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... ...

  K02768  ,IGKV3-11*02,Vg           --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... ...

                                    IMGT_______________
                                     61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                         N   R   A   T   G   I   P       A   R   F   S   G   S   G
  X01668  ,IGKV3-11*01,L6           ... ... ... ... ... AAC AGG GCC ACT GGC ATC CCA ... GCC AGG TTC AGT GGC AGT GGG

  X92342  ,IGKV3-11*01,L6a          ... ... ... ... ... --- --- --- --- --- --- --- ... --- --- --- --- --- --- ---

  L37726  ,IGKV3-11*01,13K20/13K23  ... ... ... ... ... --- --- --- --- --- --- --- ... --- --- --- --- --- --- ---

  K02768  ,IGKV3-11*02,Vg           ... ... ... ... ... --- --- --- --- --- --- --- ... --- --- --- --- --- --- ---


                                     81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                             S   G   T   D   F   T   L   T   I   S   S   L   E   P   E   D   F   A
  X01668  ,IGKV3-11*01,L6           ... ... TCT GGG ACA GAC TTC ACT CTC ACC ATC AGC AGC CTA GAG CCT GAA GAT TTT GCA

  X92342  ,IGKV3-11*01,L6a          ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  L37726  ,IGKV3-11*01,13K20/13K23  ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
                                                     R
  K02768  ,IGKV3-11*02,Vg           ... ... --- --- -G- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

                                                    _________CDR3-IMGT____________
                                    101 102 103 104 105 106 107 108 109 110 111
                                     V   Y   Y   C   Q   Q   R   S   N   W   P
  X01668  ,IGKV3-11*01,L6           GTT TAT TAC TGT CAG CAG CGT AGC AAC TGG CCT CC

  X92342  ,IGKV3-11*01,L6a          --- --- --- --- --- --- --- --- --- --- --- --

  L37726  ,IGKV3-11*01,13K20/13K23  --- --- --- --- --- -

  K02768  ,IGKV3-11*02,Vg           --- --- --- --- --- --- --- --- --- --- --- --


Created: 25/03/1997
Last updated: Monday, 11-Jul-2011 12:56:56 CEST
Author: Valérie Barbié
Contact: Marie-Paule Lefranc

Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text; Lefranc, M.-P. et al., Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838 Full text.


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