Alignment of alleles: Human IGKV1-17

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).



                                    1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                   D   I   Q   M   T   Q   S   P   S   S   L   S   A   S   V   G   D   R   V   T
  X72808  ,IGKV1-17*01,A30        GAC ATC CAG ATG ACC CAG TCT CCA TCC TCC CTG TCT GCA TCT GTA GGA GAC AGA GTC ACC

  X92334  ,IGKV1-17*01,SG3                                --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  D88254  ,IGKV1-17*01,A30        --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  D88255  ,IGKV1-17*02,A30        --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

                                                          ____________________CDR1-IMGT__________________
                                   21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                   I   T   C   R   A   S   Q   G   I   R   N   D                           L   G
  X72808  ,IGKV1-17*01,A30        ATC ACT TGC CGG GCA AGT CAG GGC ATT AGA AAT GAT ... ... ... ... ... ... TTA GGC

  X92334  ,IGKV1-17*01,SG3        --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- ---

  D88254  ,IGKV1-17*01,A30        --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- ---

  D88255  ,IGKV1-17*02,A30        --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ... --- ---

                                                                                              ______________CDR2-
                                   41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                   W   Y   Q   Q   K   P   G   K   A   P   K   R   L   I   Y   A   A   S
  X72808  ,IGKV1-17*01,A30        TGG TAT CAG CAG AAA CCA GGG AAA GCC CCT AAG CGC CTG ATC TAT GCT GCA TCC ... ...

  X92334  ,IGKV1-17*01,SG3        --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... ...

  D88254  ,IGKV1-17*01,A30        --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... ...

  D88255  ,IGKV1-17*02,A30        --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... ...

                                  IMGT_______________
                                   61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                       S   L   Q   S   G   V   P       S   R   F   S   G   S   G
  X72808  ,IGKV1-17*01,A30        ... ... ... ... ... AGT TTG CAA AGT GGG GTC CCA ... TCA AGG TTC AGC GGC AGT GGA

  X92334  ,IGKV1-17*01,SG3        ... ... ... ... ... --- --- --- --- --- --- --- ... --- --- --- --- --- --- ---

  D88254  ,IGKV1-17*01,A30        ... ... ... ... ... --- --- --- --- --- --- --- ... --- --- --- --- --- --- ---

  D88255  ,IGKV1-17*02,A30        ... ... ... ... ... --- --- --- --- --- --- --- ... --- --- --- --- --- --- ---


                                   81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                           S   G   T   E   F   T   L   T   I   S   S   L   Q   P   E   D   F   A
  X72808  ,IGKV1-17*01,A30        ... ... TCT GGG ACA GAA TTC ACT CTC ACA ATC AGC AGC CTG CAG CCT GAA GAT TTT GCA

  X92334  ,IGKV1-17*01,SG3        ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  D88254  ,IGKV1-17*01,A30        ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
                                                                                   N
  D88255  ,IGKV1-17*02,A30        ... ... --- --- --- --- --- --- --- --- --- --- -A- --- --- --- --- --- --- ---

                                                  _________CDR3-IMGT____________
                                  101 102 103 104 105 106 107 108 109 110 111
                                   T   Y   Y   C   L   Q   H   N   S   Y   P
  X72808  ,IGKV1-17*01,A30        ACT TAT TAC TGT CTA CAG CAT AAT AGT TAC CCT CC

  X92334  ,IGKV1-17*01,SG3        --- --- --- --- --- --- --- --- --- --- --- --

  D88254  ,IGKV1-17*01,A30        --- --- --- --- --- --- --- --- --- --- --- --

  D88255  ,IGKV1-17*02,A30        --- --- --- --- --- --- --- --- --- --- --- --


Created: 25/03/1997
Last updated: Monday, 11-Jul-2011 12:56:56 CEST
Author: Valérie Barbié
Contact: Marie-Paule Lefranc

Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text; Lefranc, M.-P. et al., Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838 Full text.


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