IMGT creations and updates

Content

• 2012
• 2011
• 2010
• 2009
• 2008
• 2007
• 2006
• 2005
• 2004
• 2003
• 2002
• 2001
• 2000
• 1998

About IMGT

• Information on IMGT®
  • IMGT® attachment and affiliation
  • IMGT authority: LIGM (Montpellier)
  • IMGT information system overview
  • IMGT server environment
  • IMGT history
  • IMGT executive and scientific committees
• IMGT Livre d'Or
• Citing IMGT
• IMGT sponsorship of congresses
• IMGT references
  • Publications
  • Books
  • Book chapters
  • Conferences
  • Communications
  • Demonstrations of IMGT
  • Reviews on the FactsBooks
  • Reviews on IMGT
  • IMGT theses
• Acknowledgments and Funding support
• Warranty disclaimer and Copyright notice
• Privacy and advertisement policies
• Contact

Only major updates are reported here.
Other updates are reported in individual pages or chapters.

2012

27 September 2012 - CREATION: Alignments of alleles: Rabbit (Oryctolagus cuniculus) IGL in IMGT Repertoire (IG and TR)

1. Creation of Alignments of alleles: Rabbit (Oryctolagus cuniculus) IGLV
2. Creation of Alignments of alleles: Rabbit (Oryctolagus cuniculus) IGLJ
3. Creation of Alignments of alleles: Rabbit (Oryctolagus cuniculus) IGLC

24 September 2012 - CREATION: Gene table: Rabbit (Oryctolagus cuniculus) IGLV in IMGT Repertoire (IG and TR)

1. Addition of the new genes IGLV, localized on chromosome 21 in the Gene table: Rabbit (Oryctolagus cuniculus) IGLV.

12 September 2012 - CREATION: Rabbit (Oryctolagus cuniculus) IGL in IMGT/GENE-DB

1. Addition of 43 IGLV genes in IMGT/GENE-DB, corresponding to 43 allelic sequences
2. Addition of 4 IGLJ genes in IMGT/GENE-DB, corresponding to 4 allelic sequences
3. Addition of 6 IGLC genes in IMGT/GENE-DB, corresponding to 8 allelic sequences.

12 September 2012 - UPDATE of IMGT/V-QUEST (Version 3.2.29)

1. Addition of 43 IGLV genes in IMGT/GENE-DB, corresponding to 43 allelic sequences
2. Addition of 4 IGLJ genes in IMGT/GENE-DB, corresponding to 4 allelic sequences
3. Addition of 6 IGLC genes in IMGT/GENE-DB, corresponding to 8 allelic sequences.

10 September 2012 - UPDATE: Gene table: Rabbit (Oryctolagus cuniculus) IGLJ and IGLC in IMGT Repertoire (IG and TR)

1. Addition of the genes IGLJ, localized on chromosome 21 in the Gene table: Rabbit (Oryctolagus cuniculus) IGLJ
2. Addition of the genes IGLC, localized on chromosome 21 in the Gene table: Rabbit (Oryctolagus cuniculus) IGLC

23 February 2012 - CREATION: Rhesus Monkey (Macaca Mulatta) TRB in IMGT/GENE-DB

1. Addition of 72 TRBV genes in IMGT/GENE-DB, corresponding to 72 allelic sequences
2. Addition of 2 TRBD genes in IMGT/GENE-DB, corresponding to 2 allelic sequences
3. Addition of 14 TRBJ genes in IMGT/GENE-DB, corresponding to 17 allelic sequences
4. Addition of 2 TRBC genes in IMGT/GENE-DB, corresponding to 2 allelic sequences.

23 February 2012 - UPDATE of IMGT/V-QUEST (Version 3.2.24)

1. Addition of 72 Rhesus Monkey (Macaca Mulatta) TRBV genes in IMGT/V-QUEST, corresponding to 72 allelic sequences
2. Addition of 2 Rhesus Monkey (Macaca Mulatta) TRBD genes in IMGT/V-QUEST, corresponding to 2 allelic sequences
3. Addition of 14 Rhesus Monkey (Macaca Mulatta) TRBJ genes in IMGT/V-QUEST, corresponding to 17 allelic sequences

2011

22 December 2011 - UPDATE of IMGT/CLL-DB (Version 1.2.0)

1. Update of the annotations of the IMGT/CLL-DB sequences with the last version of IMGT/V-QUEST (IMGT/V-QUEST programme version: 3.2.22; IMGT/V-QUEST reference directory release: 201148-5).

26 April 2011 - CREATION: Gene exon/intron organization: Norway rat (Rattus norvegicus) IGHC, in IMGT Repertoire (IG and TR)

1. Creation of Gene exon/intron organization: Norway rat (Rattus norvegicus) immunoglobulin constant genes.

14 April 2011 - UPDATE: Locus representation: House mouse (Mus musculus) TRA/TRD

1. Insertion of 300 kb between TRAV15D-3 and TRAV7-2 in Locus representation: House mouse (Mus musculus) TRA/TRD, that corresponds to a triplication of part of the TRAV genes for strain C57BL/6J.

23 February 2011 - UPDATE: Colliers de Perles: House mouse (Mus musculus) TRAV

1. Creation of Colliers de Perles of 34 triplicated genes in the Colliers de Perles: House mouse (Mus musculus) TRAV for strain C57BL/6J.

03 February 2011 - UPDATE: Gene table: House mouse (Mus musculus) TRAV in IMGT Repertoire (IG and TR)

1. Addition of 34 triplicated genes in the Gene table: House mouse (Mus musculus) TRAV for strain C57BL/6J.

14 January 2011 - IMGT/CLL-DB is on-line

1. IMGT/CLL-DB Query page (bylaws) is on-line in IMGT sequence databases

10 January 2011 - UPDATE of IMGT/GeneFrequency (Version 1.1.0)

1. Improvement of IMGT/GeneFrequency Search page
2. IMGT/GeneFrequency smaller, faster and more user-friendly
   • Use of AJAX (Asynchronous JavaScript and XML) to create interactive web application and to generate drop-down lists dynamically, without interfering with the display and behavior of the existing page.
     

2010

01 December 2010 - UPDATE of IMGT/GeneFrequency (Version 1.0.1)

1. Improvement of IMGT/GeneFrequency Search page
2. Addition of a summary in the result page
   • Results summary (Number of sequences per locus and per gene) is available for all IMGT/LIGM-DB rearranged sequences.
     For each locus, Group and gene, the number of IMGT/LIGM-DB sequences with rearranged Gene is indicated.

22 November 2010 - IMGT/HighV-QUEST is on line

1. IMGT/HighV-QUEST is on line for batches of up to 150 000 IG and TR nucleotide sequences per run
2. User support sections (Help, FAQ and Documentation) are online and accessible from IMGT/HighV-QUEST page

22 September 2010 - CREATION: Alignments of alleles: Rabbit (Oryctolagus cuniculus) IGH in IMGT Repertoire (IG and TR)

1. Creation of Alignments of alleles: Rabbit (Oryctolagus cuniculus) IGH V-REGION
2. Creation of Alignments of alleles: Rabbit (Oryctolagus cuniculus) IGH D-REGION
3. Creation of Alignments of alleles: Rabbit (Oryctolagus cuniculus) IGH J-REGION
4. Creation of Alignments of alleles: Rabbit (Oryctolagus cuniculus) IGH C-REGION

15 July 2010 - CREATION: Protein displays: Rabbit (Oryctolagus cuniculus) IGH in IMGT Repertoire (IG and TR)

1. Creation of Protein displays: Rabbit (Oryctolagus cuniculus) IGH V-REGION
2. Creation of Protein displays: Rabbit (Oryctolagus cuniculus) IGH D-REGION
3. Creation of Protein displays: Rabbit (Oryctolagus cuniculus) IGH J-REGION
4. Creation of Protein displays: Rabbit (Oryctolagus cuniculus) IGH C-REGION

29 June 2010 - UPDATE: Gene table: Human (Homo sapiens) IGHV orphons in IMGT Repertoire (IG and TR)

1. Addition of a new orphon gene IGHV1/OR21-1, localized on chromosome 21 in the Gene table: Human (Homo sapiens) IGHV orphons.

28 May 2010 - UPDATE: Human (Homo sapiens) IGH orphon in IMGT/GENE-DB

1. Addition of a new Chromosomal orphon set: IGHV/OR21, localized on chromosome 21 in IMGT/GENE-DB
2. Addition of a new orphon gene: IGHV1/OR21-1 in IMGT/GENE-DB

7-11 May 2010 - CREATION: Alignments of alleles: Rabbit (Oryctolagus cuniculus) IGK in IMGT Repertoire (IG and TR)

1. Creation of Alignments of alleles: Rabbit (Oryctolagus cuniculus) IGK V-REGION
2. Creation of Alignments of alleles: Rabbit (Oryctolagus cuniculus) IGK J-REGION
3. Creation of Alignments of alleles: Rabbit (Oryctolagus cuniculus) IGK C-REGION

22 April 2010 - CREATION: IMGT-ONTOLOGY at the NCBO BioPortal

1. IMGT-ONTOLOGY formalized in OWL at NCBO BioPortal http://bioportal.bioontology.org/ (IDENTIFICATION axiom)

15 April 2010 - UPDATE: Rabbit (Oryctolagus cuniculus) IGKC1 in IMGT/GENE-DB

1. Creation of a new allele : IGKC1*09 (K01359) in IMGT/GENE-DB
2. UPDATE of functionality of IGKC1*05 (X03050): initially F, now is ORF in IMGT/GENE-DB

12 April 2010 - CREATION: Sequences from Kabat in IMGT/2Dstructure-DB

1. Addition of 146 Human (Homo sapiens) sequences from Kabat in IMGT/2Dstructure-DB
2. Addition of 184 Mouse (Mus musculus) sequences from Kabat in IMGT/2Dstructure-DB
3. Addition of 15 Rabbit (Oryctolagus cuniculus) sequences from Kabat in IMGT/2Dstructure-DB

12 April 2010 - UPDATE: Gene table: Rabbit (Oryctolagus cuniculus) IGKC

1. Addition of 1 new allele IGKC1*09 (K01359) in Gene table: Rabbit (Oryctolagus cuniculus) IGKC
2. UPDATE of functionality of IGKC1*05 (X03050): initially F, now is ORF.

16 February 2010 - CREATION: Gene Table: Rabbit (Oryctolagus cuniculus) IGH in IMGT Repertoire (IG and TR)

1. Creation of Gene Table: Rabbit (Oryctolagus cuniculus) IGH V-REGION
2. Creation of Gene Table: Rabbit (Oryctolagus cuniculus) IGH D-REGION
3. Creation of Gene Table: Rabbit (Oryctolagus cuniculus) IGH J-REGION
4. Creation of Gene Table: Rabbit (Oryctolagus cuniculus) IGH C-REGION

16 Fevrier 2010 - Creation: Rabbit (Oryctolagus cuniculus) IGH in IMGT/GENE-DB

1. Addition of 65 IGHV genes in IMGT/GENE-DB, corresponding to 65 allelic sequences
2. Addition of 11 IGHD genes in IMGT/GENE-DB, corresponding to 11 allelic sequences
3. Addition of 06 IGHJ genes in IMGT/GENE-DB, corresponding to 11 allelic sequences
4. Addition of 16 IGHC genes in IMGT/GENE-DB, corresponding to 27 allelic sequences

15 February 2010 - CREATION: Protein displays: Rabbit (Oryctolagus cuniculus) IGKJ and IGKC in IMGT Repertoire (IG and TR)

1. Creation of Protein display: Rabbit (Oryctolagus cuniculus) IGK J-REGIONs in IMGT repertoire
2. Creation of Protein display: Rabbit (Oryctolagus cuniculus) IGK C-REGIONs in IMGT repertoire

05 February 2010 - UPDATE: Protein display: Rabbit (Oryctolagus cuniculus) IGKV in IMGT Repertoire (IG and TR)

1. Addition of the new Protein display rules in the Protein display: Rabbit (Oryctolagus cuniculus) IGK V-REGIONs

01 February 2010 - UPDATE: Gene Table: Rabbit (Oryctolagus cuniculus) IGKV in IMGT Repertoire (IG and TR)

1. Addition of "Allele name", "Strain", "Clone names", "Position in the sequence" columns in Gene table: Rabbit (Oryctolagus cuniculus) IGKV in IMGT Repertoire

29 January 2010 - UPDATE: Rabbit (Oryctolagus cuniculus) IGKV in IMGT/GENE-DB

1. Addition of 68 IGKV genes in IMGT/GENE-DB, corresponding to 70 allelic sequences

• IMGT Home page
• IMGT Repertoire (IG and TR)
• IMGT Repertoire (MH)
• IMGT Repertoire (RPI)
• IMGT Index
• IMGT Scientific chart
• IMGT Education
• IMGT Latest news

Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text; Lefranc, M.-P. et al., Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838 Full text.
For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.

        

IMGT founder and director:

Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr

Bioinformatics manager:

Véronique Giudicelli Veronique.Giudicelli@igh.cnrs.fr

Computer manager:

Patrice Duroux Patrice.Duroux@igh.cnrs.fr

Webmaster:

Chantal Ginestoux Chantal.Ginestoux@igh.cnrs.fr

• Citing IMGT
• Warranty disclaimer and copyright notice
• Privacy policy and advertisement policy

© Copyright 1995-2013 IMGT®, the international ImMunoGeneTics information system®