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IMGT prototypes based on the IMGT concepts of description (IMGT/LIGM-DB labels)



IDENTIFICATION DESCRIPTION
MoleculeUnit leafconcepts Molecule_EntityType leafconcepts GeneType leafconcepts ConfigurationType leafconcepts MoleculeType leafconcepts Molecule_EntityPrototype leafconcepts
gene
V-gene* V germline gDNA V-GENE
D-gene* D D-GENE
J-gene* J J-GENE
J-C-gene J, C J-C-GENE
C-gene* C undefined C-GENE
L-conventional-gene conventional L-CONVENTIONAL-GENE
V-D-gene V, D partially_rearranged V-D-GENE
D-J-gene D, J D-J-GENE
V-J-gene* V, J rearranged V-J-GENE
V-D-J-gene* V, D, J V-D-J-GENE
sequence
L-V-sequence V germline cDNA L-V-SEQUENCE
D-sequence D D-SEQUENCE
J-sequence J J-SEQUENCE
J-C-sequence J, C J-C-SEQUENCE
C-sequence C undefined C-SEQUENCE
L-nt-sequence conventional L-NT-SEQUENCE
nt-sequence conventional NT-SEQUENCE
L-V-D-sequence V, D partially_rearranged L-V-D-SEQUENCE
D-J-C-sequence D, J, C D-J-C-SEQUENCE
L-V-J-C-sequence* V, J, C rearranged L-V-J-C-SEQUENCE
L-V-D-J-C-sequence* V, D, J, C L-V-D-J-C-SEQUENCE


Notes:
(*) An asterisk indicates the 8 leafconcepts that are the most classical representatives of IG and TR identification.



Each "Molecule_EntityType" leafconcept is linked to a "Molecule_EntityPrototype" leafconcept.



IMGT references:
Last updated:
Thursday, 18-Apr-2013 22:00:05 CEST
Authors:
Souphatta Sasorith and Marie-Paule Lefranc
Editor:
Chantal Ginestoux
Scientific officer:
Marie-Paule Lefranc